Description : Pseudouridine synthase I, TruA, alpha/beta domain [Interproscan].
Gene families : OG_01_0000916 (OrthoFinder) Phylogenetic Tree(s): OG0000916_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: OT_11G00590.1 | |
Cluster | HCCA: Cluster_9 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre13.g591501 | 30784777 | RNA processing.RNA... | 0.03 | OrthoFinder | |
Dusal.0386s00003.1 | 33191488 | Hypothetical protein | 0.05 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEA | Interproscan |
MF | GO:0003723 | RNA binding | IEA | Interproscan |
BP | GO:0009451 | RNA modification | IEA | Interproscan |
MF | GO:0009982 | pseudouridine synthase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Enrichment |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Enrichment |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Enrichment |
MF | GO:0004527 | exonuclease activity | IEP | Enrichment |
BP | GO:0006396 | RNA processing | IEP | Enrichment |
BP | GO:0006397 | mRNA processing | IEP | Enrichment |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Enrichment |
BP | GO:0008380 | RNA splicing | IEP | Enrichment |
MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Enrichment |
BP | GO:0016071 | mRNA metabolic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR020097 | PsdUridine_synth_TruA_a/b_dom | 198 | 311 |
No external refs found! |