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  5. OT_10G03400.1

OT_10G03400.1


Description : Signal transduction response regulator, receiver domain; WD40 repeat [Interproscan].


Gene families : OG_01_0001635 (OrthoFinder) Phylogenetic Tree(s): OG0001635_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_10G03400.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cre01.g053850 30788730 WD repeat-containing protein RUP1 OS=Arabidopsis thaliana 0.11 OrthoFinder
Cre02.g085050 30785833 E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cz05g04250.t1 No alias WD40 repeat [Interproscan]. 0.07 OrthoFinder
Cz09g04220.t1 No alias Hypothetical protein 0.06 OrthoFinder
Cz10g05130.t1 No alias WD40 repeat; Zinc finger, C3HC4 type (RING finger)... 0.02 OrthoFinder
XM_002503783.1 MICPUN_59822, 59822 Response regulator receiver/WD40 domain fusion protein 0.05 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 32 142
IPR001680 WD40_repeat 819 854
IPR001680 WD40_repeat 864 900
IPR001680 WD40_repeat 740 770
No external refs found!