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  5. OT_10G01420.1

OT_10G01420.1


Description : Zinc finger, RING-type [Interproscan].


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_10G01420.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000158.69 tig00000158_g10175.t1 No description available 0.02 OrthoFinder
Dusal.0110s00028.1 33194367 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
EOD07947 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
EOD18251 No alias Zinc finger, RING-type [Interproscan]. 0.03 OrthoFinder
EOD25132 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
Sro366_g127550.1 Contig1993.g17064 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold510.4 510.4 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold75.16 75.16 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
TP05G03820.1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
XM_002503475.1 MICPUN_101390, 101390 Zinc finger, RING-type [Interproscan]. 0.04 OrthoFinder
XM_003055570.1 MicpuC2_38033, 38033 Zinc finger, RING-type [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
CC GO:0005929 cilium IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
CC GO:0031514 motile cilium IEP Enrichment
BP GO:0040011 locomotion IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
BP GO:0048870 cell motility IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
CC GO:0120025 plasma membrane bounded cell projection IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 244 287
No external refs found!