- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Zinc finger, RING-CH-type [Interproscan].
Gene families : OG_01_0000440 (OrthoFinder) Phylogenetic Tree(s): OG0000440_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: OT_10G00190.1 | |
| Cluster | HCCA: Cluster_27 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre09.g409650 | 30781487 | No description available | 0.03 | OrthoFinder | |
| Cre16.g686285 | 30776872 | No description available | 0.02 | OrthoFinder | |
| Cz09g28230.t1 | No alias | Zinc finger, RING-CH-type [Interproscan]. | 0.02 | OrthoFinder | |
| XM_003064815.1 | MicpuC2_49333, 49333 | Zinc finger, RING-CH-type [Interproscan]. | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004645 | 1,4-alpha-oligoglucan phosphorylase activity | IEP | Enrichment |
| CC | GO:0005667 | transcription regulator complex | IEP | Enrichment |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Enrichment |
| MF | GO:0008184 | glycogen phosphorylase activity | IEP | Enrichment |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Enrichment |
| BP | GO:0010468 | regulation of gene expression | IEP | Enrichment |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Enrichment |
| MF | GO:0046912 | acyltransferase, acyl groups converted into alkyl on transfer | IEP | Enrichment |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Enrichment |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Enrichment |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Enrichment |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Enrichment |
| MF | GO:2001070 | starch binding | IEP | Enrichment |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011016 | Znf_RING-CH | 39 | 86 |
| No external refs found! |