Description : Ribosomal protein S7e [Interproscan].
Gene families : OG_01_0003112 (OrthoFinder) Phylogenetic Tree(s): OG0003112_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: OT_09G03160.1 | |
Cluster | HCCA: Cluster_6 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00021682.9 | tig00021682_g23099.t1 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.3 | OrthoFinder | |
Cre12.g498900 | 30792089, RPS7 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.28 | OrthoFinder | |
Cz02g24040.t1 | No alias | Ribosomal protein S7e [Interproscan]. | 0.18 | OrthoFinder | |
Dusal.0024s00020.1 | 33202211 | Ribosomal protein S7e [Interproscan]. | 0.18 | OrthoFinder | |
EOD37465 | No alias | Ribosomal protein S7e; High mobility group box domain... | 0.05 | OrthoFinder | |
PTI_28G01270.1 | No alias | Ribosomal protein S7e [Interproscan]. | 0.38 | OrthoFinder | |
Sro730_g194010.1 | Contig80.g833 | 40S ribosomal protein S7 | 0.35 | OrthoFinder | |
SymbC1.scaffold1753.10 | 1753.10 | Ribosomal protein S7e [Interproscan]. | 0.08 | OrthoFinder | |
TP02G05030.1 | No alias | Ribosomal protein S7e [Interproscan]. | 0.23 | OrthoFinder | |
Vocar.0006s0277.1 | 32894204 | Ribosomal protein S7e [Interproscan]. | 0.11 | OrthoFinder | |
XM_002508754.1 | MICPUN_91845, 91845 | Ribosomal protein S7e [Interproscan]. | 0.29 | OrthoFinder | |
XM_003056772.1 | MicpuC2_46695, 46695 | Ribosomal protein S7e [Interproscan]. | 0.15 | OrthoFinder | |
lcl|LHPG02000024.1_cds_PRW20375.1_5582 | PRW20375 | 40S ribosomal S7 isoform A | 0.16 | OrthoFinder | |
lcl|VRMN01000004.1_cds_KAA8494704.1_3234 | KAA8494704 | 40S ribosomal protein S7 | 0.24 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0004107 | chorismate synthase activity | IEP | Enrichment |
MF | GO:0004455 | ketol-acid reductoisomerase activity | IEP | Enrichment |
BP | GO:0006082 | organic acid metabolic process | IEP | Enrichment |
MF | GO:0008097 | 5S rRNA binding | IEP | Enrichment |
BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Enrichment |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Enrichment |
BP | GO:0009081 | branched-chain amino acid metabolic process | IEP | Enrichment |
BP | GO:0009082 | branched-chain amino acid biosynthetic process | IEP | Enrichment |
CC | GO:0015934 | large ribosomal subunit | IEP | Enrichment |
BP | GO:0016053 | organic acid biosynthetic process | IEP | Enrichment |
MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | Enrichment |
MF | GO:0019843 | rRNA binding | IEP | Enrichment |
CC | GO:0044391 | ribosomal subunit | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000554 | Ribosomal_S7e | 6 | 187 |
No external refs found! |