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Description : Ribosomal protein L18e/L15P [Interproscan].
Gene families : OG_01_0003478 (OrthoFinder) Phylogenetic Tree(s): OG0003478_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: OT_09G03130.1 | |
| Cluster | HCCA: Cluster_6 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000142.18 | tig00000142_g8653.t1 | 60S ribosomal protein L18 (Fragment) OS=Cicer arietinum | 0.23 | OrthoFinder | |
| Cre12.g512600 | 30792347, RPL18 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.22 | OrthoFinder | |
| Cz02g17120.t1 | No alias | Ribosomal protein L18e/L15P [Interproscan]. | 0.17 | OrthoFinder | |
| Dusal.0152s00012.1 | 33186214 | Ribosomal protein L18e/L15P [Interproscan]. | 0.19 | OrthoFinder | |
| EOD35516 | No alias | Ribosomal protein L18e/L15P [Interproscan]. | 0.12 | OrthoFinder | |
| PTI_22G00610.1 | No alias | Ribosomal protein L18e/L15P [Interproscan]. | 0.29 | OrthoFinder | |
| Sro84_g044900.1 | Contig220.g2623 | 60S ribosomal protein L18 | 0.29 | OrthoFinder | |
| SymbC1.scaffold2696.1 | 2696.1 | Ribosomal protein L18e/L15P [Interproscan]. | 0.05 | OrthoFinder | |
| TP07G02970.1 | No alias | Ribosomal protein L18e/L15P [Interproscan]. | 0.23 | OrthoFinder | |
| Vocar.0016s0167.1 | 32898010 | Ribosomal protein L18e/L15P [Interproscan]. | 0.06 | OrthoFinder | |
| XM_002506174.1 | MICPUN_64167, 64167 | Ribosomal protein L18 | 0.25 | OrthoFinder | |
| lcl|LHPG02000024.1_cds_PRW20417.1_5544 | PRW20417 | 60S ribosomal L18-3 | 0.15 | OrthoFinder | |
| lcl|VRMN01000003.1_cds_KAA8496158.1_2156 | KAA8496158 | 60S ribosomal protein L18-2 | 0.11 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
| MF | GO:0004107 | chorismate synthase activity | IEP | Enrichment |
| MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005840 | ribosome | IEP | Enrichment |
| BP | GO:0006412 | translation | IEP | Enrichment |
| BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| MF | GO:0008097 | 5S rRNA binding | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| CC | GO:0015934 | large ribosomal subunit | IEP | Enrichment |
| MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| MF | GO:0019843 | rRNA binding | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
| BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| CC | GO:0044391 | ribosomal subunit | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021131 | Ribosomal_L18e/L15P | 2 | 186 |
| No external refs found! |