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  5. OT_09G02120.1

OT_09G02120.1


Description : Proteasome component (PCI) domain; 26S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1 [Interproscan].


Gene families : OG_01_0003515 (OrthoFinder) Phylogenetic Tree(s): OG0003515_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_09G02120.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000615.75 tig00000615_g2605.t1 Protein degradation.26S proteasome.regulatory... 0.04 OrthoFinder
Cre13.g581450 30784003, RPN7 Protein degradation.26S proteasome.regulatory... 0.07 OrthoFinder
Cz08g26110.t1 No alias 26S proteasome regulatory subunit Rpn7/COP9 signalosome... 0.03 OrthoFinder
EOD23564 No alias 26S proteasome regulatory subunit Rpn7/COP9 signalosome... 0.02 OrthoFinder
EOD33243 No alias 26S proteasome regulatory subunit Rpn7/COP9 signalosome... 0.05 OrthoFinder
PTI_02G06010.1 No alias 26S proteasome regulatory subunit Rpn7/COP9 signalosome... 0.05 OrthoFinder
Sro2134_g315960.1 Contig2353.g19341 ATPase regulatory subunit 6 0.08 OrthoFinder
TP05G01650.1 No alias Proteasome component (PCI) domain; 26S proteasome... 0.04 OrthoFinder
XM_002508764.1 MICPUN_109050, 109050 Proteasome component (PCI) domain; 26S proteasome... 0.06 OrthoFinder
XM_003056762.1 MicpuC2_44063, 44063 26S proteasome regulatory subunit Rpn7/COP9 signalosome... 0.04 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60726.1_4407 PRW60726 26S proteasome non-ATPase regulatory subunit 6-like protein 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009891 positive regulation of biosynthetic process IEP Enrichment
BP GO:0009893 positive regulation of metabolic process IEP Enrichment
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Enrichment
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
BP GO:0031325 positive regulation of cellular metabolic process IEP Enrichment
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Enrichment
BP GO:0032786 positive regulation of DNA-templated transcription, elongation IEP Enrichment
BP GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Enrichment
BP GO:0034243 regulation of transcription elongation from RNA polymerase II promoter IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Enrichment
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0048518 positive regulation of biological process IEP Enrichment
BP GO:0048522 positive regulation of cellular process IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051254 positive regulation of RNA metabolic process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Enrichment
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Enrichment
InterPro domains Description Start Stop
IPR000717 PCI_dom 279 377
IPR019585 Rpn7/CSN1 84 259
No external refs found!