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Description : Cleft lip and palate transmembrane 1 [Interproscan].
Gene families : OG_01_0001019 (OrthoFinder) Phylogenetic Tree(s): OG0001019_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: OT_09G01930.1 | |
| Cluster | HCCA: Cluster_5 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sro120_g058500.1 | Contig2411.g19728 | Lip and palate transmembrane protein 1-like protein | 0.02 | OrthoFinder | |
| lcl|VRMN01000003.1_cds_KAA8496006.1_2004 | KAA8496006 | CLPTM1-like membrane protein cnrB | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016021 | integral component of membrane | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0003994 | aconitate hydratase activity | IEP | Enrichment |
| MF | GO:0004565 | beta-galactosidase activity | IEP | Enrichment |
| MF | GO:0004788 | thiamine diphosphokinase activity | IEP | Enrichment |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Enrichment |
| MF | GO:0004843 | thiol-dependent deubiquitinase | IEP | Enrichment |
| BP | GO:0006099 | tricarboxylic acid cycle | IEP | Enrichment |
| MF | GO:0008242 | omega peptidase activity | IEP | Enrichment |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Enrichment |
| BP | GO:0009229 | thiamine diphosphate biosynthetic process | IEP | Enrichment |
| CC | GO:0009341 | beta-galactosidase complex | IEP | Enrichment |
| MF | GO:0015925 | galactosidase activity | IEP | Enrichment |
| BP | GO:0016567 | protein ubiquitination | IEP | Enrichment |
| MF | GO:0016740 | transferase activity | IEP | Enrichment |
| MF | GO:0016778 | diphosphotransferase activity | IEP | Enrichment |
| MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Enrichment |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Enrichment |
| MF | GO:0030975 | thiamine binding | IEP | Enrichment |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | Enrichment |
| BP | GO:0042357 | thiamine diphosphate metabolic process | IEP | Enrichment |
| MF | GO:0043015 | gamma-tubulin binding | IEP | Enrichment |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Enrichment |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Enrichment |
| MF | GO:0101005 | deubiquitinase activity | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR008429 | CLPTM1 | 21 | 450 |
| No external refs found! |