1. Home
  2. Species
  3. Ostreococcus tauri
  4. Sequence
  5. OT_08G03250.1

OT_08G03250.1


Description : Ribosomal protein L35A [Interproscan].


Gene families : OG_01_0003454 (OrthoFinder) Phylogenetic Tree(s): OG0003454_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_08G03250.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020723.23 tig00020723_g13442.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 OrthoFinder
Cre10.g459250 30790514, RPL35a Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 OrthoFinder
Cz08g32140.t1 No alias Ribosomal protein L35A [Interproscan]. 0.15 OrthoFinder
Dusal.0293s00005.1 33190176 Ribosomal protein L35A [Interproscan]. 0.08 OrthoFinder
EOD28237 No alias Ribosomal protein L35A [Interproscan]. 0.12 OrthoFinder
EOD40099 No alias 60S ribosomal protein L35A [Ensembl]. 0.12 OrthoFinder
PTI_26G00860.1 No alias Ribosomal protein L35A [Interproscan]. 0.17 OrthoFinder
Sro60_g034780.1 Contig797.g8955 60S ribosomal protein L35a 0.23 OrthoFinder
SymbC1.scaffold1015.3 1015.3 Ribosomal protein L35A [Interproscan]. 0.03 OrthoFinder
TP10G03680.1 No alias Ribosomal protein L35A [Interproscan]. 0.09 OrthoFinder
Vocar.0020s0177.1 32886748 Ribosomal protein L35A [Interproscan]. 0.1 OrthoFinder
XM_002508291.1 MICPUN_108826, 108826 Ribosomal protein L35A [Interproscan]. 0.23 OrthoFinder
XM_003058988.1 MicpuC2_58446, 58446 Ribosomal protein L35A [Interproscan]. 0.09 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57926.1_8416 PRW57926 60S ribosomal L35a-3 0.11 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495080.1_3610 KAA8495080 60S ribosomal protein L35a 0.16 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004107 chorismate synthase activity IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0004664 prephenate dehydratase activity IEP Enrichment
MF GO:0004779 sulfate adenylyltransferase activity IEP Enrichment
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004820 glycine-tRNA ligase activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006426 glycyl-tRNA aminoacylation IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006558 L-phenylalanine metabolic process IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009094 L-phenylalanine biosynthetic process IEP Enrichment
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Enrichment
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001780 Ribosomal_L35A 9 103
No external refs found!