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  5. OT_08G02290.1

OT_08G02290.1


Description : XPG N-terminal; XPG-I domain [Interproscan].


Gene families : OG_01_0001910 (OrthoFinder) Phylogenetic Tree(s): OG0001910_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_08G02290.1
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Cre03.g145687 30787113 DNA damage response.DNA repair mechanisms.base excision... 0.04 OrthoFinder
Cz02g04010.t1 No alias XPG N-terminal; XPG-I domain [Interproscan]. 0.04 OrthoFinder
Cz02g04020.t1 No alias Hypothetical protein 0.02 OrthoFinder
EOD20908 No alias XPG-I domain; XPG N-terminal [Interproscan]. 0.01 OrthoFinder
Sro292_g109630.1 Contig484.g6533 Flap endonuclease 1 0.02 OrthoFinder
XM_002501708.1 MICPUN_96332, 96332 Flap endonuclease-1 (FEN1) 0.04 OrthoFinder
XM_003058867.1 MicpuC2_4172, 4172 XPG N-terminal; XPG-I domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
BP GO:0000077 DNA damage checkpoint signaling IEP Enrichment
CC GO:0000145 exocyst IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006333 chromatin assembly or disassembly IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0031570 DNA integrity checkpoint signaling IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0042770 signal transduction in response to DNA damage IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
InterPro domains Description Start Stop
IPR006086 XPG-I_dom 148 234
IPR006085 XPG_DNA_repair_N 1 108
No external refs found!