OT_08G00880.1

Description : Cold-shock protein, DNA-binding [Interproscan].

Gene families : OG_01_0000183 (OrthoFinder) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: OT_08G00880.1
Cluster	HCCA: Cluster_38

Target	Alias	Description	ECC score	Gene Family Method	Actions
Sro42_g025490.1	Contig312.g4126	Probable cold shock protein A	0.02	OrthoFinder
lcl\|VRMN01000002.1_cds_KAA8496406.1_135	KAA8496406	Cold shock domain-containing protein 4	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005741	mitochondrial outer membrane	IEP	Enrichment
BP	GO:0016567	protein ubiquitination	IEP	Enrichment
CC	GO:0019867	outer membrane	IEP	Enrichment
CC	GO:0031968	organelle outer membrane	IEP	Enrichment
BP	GO:0032446	protein modification by small protein conjugation	IEP	Enrichment
CC	GO:0098588	bounding membrane of organelle	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002059	CSP_DNA-bd	10	71

External Links

No external refs found!