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  5. OT_08G00260.1

OT_08G00260.1


Description : Short-chain dehydrogenase/reductase SDR [Interproscan].


Gene families : OG_01_0000332 (OrthoFinder) Phylogenetic Tree(s): OG0000332_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_08G00260.1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Sro1337_g264110.1 Contig951.g9833 Uncharacterized oxidoreductase C663 0.03 OrthoFinder
Sro38_g023640.1 Contig1551.g14099 Uncharacterized oxidoreductase C663 0.03 OrthoFinder
Sro61_g035020.1 Contig3112.g24755 Dehydrogenase/reductase SDR family member 7B 0.02 OrthoFinder
XM_002500756.1 MICPUN_56634, 56634 Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.03 OrthoFinder
XM_002502978.1 MICPUN_59627, 59627 Short-chain dehydrogenase/reductase 0.03 OrthoFinder
XM_002508669.1 MICPUN_97949, 97949 Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01003589.1_cds_GFH27717.1_22194 HaLaN_26087, GFH27717 Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004834 tryptophan synthase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006568 tryptophan metabolic process IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006586 indolalkylamine metabolic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
MF GO:0015109 chromate transmembrane transporter activity IEP Enrichment
BP GO:0015703 chromate transport IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0042430 indole-containing compound metabolic process IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
MF GO:0046422 violaxanthin de-epoxidase activity IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR002347 SDR_fam 98 287
No external refs found!