Description : LSM domain, eukaryotic/archaea-type [Interproscan].
Gene families : OG_01_0000999 (OrthoFinder) Phylogenetic Tree(s): OG0000999_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: OT_08G00170.1 | |
Cluster | HCCA: Cluster_65 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre12.g538750 | 30791720, LSM1 | RNA processing.RNA splicing.U6-associated LSm accessory... | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000347 | THO complex | IEP | Enrichment |
CC | GO:0000445 | THO complex part of transcription export complex | IEP | Enrichment |
CC | GO:0000782 | telomere cap complex | IEP | Enrichment |
CC | GO:0000783 | nuclear telomere cap complex | IEP | Enrichment |
MF | GO:0003697 | single-stranded DNA binding | IEP | Enrichment |
CC | GO:0005739 | mitochondrion | IEP | Enrichment |
CC | GO:0005743 | mitochondrial inner membrane | IEP | Enrichment |
CC | GO:0005747 | mitochondrial respiratory chain complex I | IEP | Enrichment |
BP | GO:0006729 | tetrahydrobiopterin biosynthetic process | IEP | Enrichment |
BP | GO:0006777 | Mo-molybdopterin cofactor biosynthetic process | IEP | Enrichment |
MF | GO:0008124 | 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | IEP | Enrichment |
MF | GO:0008483 | transaminase activity | IEP | Enrichment |
BP | GO:0016192 | vesicle-mediated transport | IEP | Enrichment |
MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Enrichment |
BP | GO:0019720 | Mo-molybdopterin cofactor metabolic process | IEP | Enrichment |
CC | GO:0019866 | organelle inner membrane | IEP | Enrichment |
CC | GO:0030008 | TRAPP complex | IEP | Enrichment |
CC | GO:0030118 | clathrin coat | IEP | Enrichment |
CC | GO:0030125 | clathrin vesicle coat | IEP | Enrichment |
CC | GO:0030130 | clathrin coat of trans-Golgi network vesicle | IEP | Enrichment |
CC | GO:0030132 | clathrin coat of coated pit | IEP | Enrichment |
CC | GO:0030964 | NADH dehydrogenase complex | IEP | Enrichment |
CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
BP | GO:0034311 | diol metabolic process | IEP | Enrichment |
BP | GO:0034312 | diol biosynthetic process | IEP | Enrichment |
BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Enrichment |
BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:0043545 | molybdopterin cofactor metabolic process | IEP | Enrichment |
CC | GO:0045271 | respiratory chain complex I | IEP | Enrichment |
BP | GO:0046146 | tetrahydrobiopterin metabolic process | IEP | Enrichment |
BP | GO:0046165 | alcohol biosynthetic process | IEP | Enrichment |
BP | GO:0046173 | polyol biosynthetic process | IEP | Enrichment |
BP | GO:0051189 | prosthetic group metabolic process | IEP | Enrichment |
CC | GO:0098797 | plasma membrane protein complex | IEP | Enrichment |
CC | GO:0098803 | respiratory chain complex | IEP | Enrichment |
CC | GO:0140513 | nuclear protein-containing complex | IEP | Enrichment |
BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Enrichment |
CC | GO:1990879 | CST complex | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001163 | LSM_dom_euk/arc | 12 | 75 |
No external refs found! |