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  5. OT_07G04290.1

OT_07G04290.1


Description : Ribosomal protein L37e [Interproscan].


Gene families : OG_01_0004504 (OrthoFinder) Phylogenetic Tree(s): OG0004504_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_07G04290.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020610.80 tig00020610_g12026.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder
Cre10.g430400 30789852, RPL37 Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 OrthoFinder
Dusal.0057s00022.1 33192917 Ribosomal protein L37e [Interproscan]. 0.04 OrthoFinder
EOD21080 No alias Ribosomal protein L37e [Interproscan]. 0.1 OrthoFinder
EOD38116 No alias Ribosomal protein L37e [Interproscan]. 0.1 OrthoFinder
PTI_03G04990.1 No alias Hypothetical protein 0.14 OrthoFinder
Sro185_g080500.1 Contig1228.g11525 Probable 60S ribosomal protein L37-B 0.25 OrthoFinder
SymbC1.scaffold2154.5 2154.5 Ribosomal protein L37e [Interproscan]. 0.07 OrthoFinder
SymbC1.scaffold625.1 625.1 Ribosomal protein L37e [Interproscan]. 0.02 OrthoFinder
Vocar.0005s0266.1 32883802 Ribosomal protein L37e [Interproscan]. 0.09 OrthoFinder
XM_002499501.1 MICPUN_93506, 93506 Ribosomal protein L37e (RPL37E) 0.19 OrthoFinder
XM_003058226.1 MicpuC2_33223, 33223 Ribosomal protein L37e [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60787.1_4510 PRW60787 Ribosomal L37e 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004107 chorismate synthase activity IEP Enrichment
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001569 Ribosomal_L37e 6 56
No external refs found!