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  5. OT_07G03570.1

OT_07G03570.1


Description : RNA 3'-terminal phosphate cyclase domain; RNA 3'-terminal phosphate cyclase, insert domain [Interproscan].


Gene families : OG_01_0003422 (OrthoFinder) Phylogenetic Tree(s): OG0003422_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_07G03570.1
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Cre09.g400367 30780907, RCL1 Probable RNA 3-terminal phosphate cyclase-like protein... 0.11 OrthoFinder
PTI_19G00050.1 No alias RNA 3'-terminal phosphate cyclase, insert domain; RNA... 0.06 OrthoFinder
Sro1551_g281780.1 Contig1492.g13635 Probable RNA 3'-terminal phosphate cyclase-like protein 0.1 OrthoFinder
TP12G01230.1 No alias RNA 3'-terminal phosphate cyclase domain; RNA... 0.06 OrthoFinder
Vocar.0008s0398.1 32897193 RNA 3'-terminal phosphate cyclase, insert domain; RNA... 0.02 OrthoFinder
XM_002502767.1 MICPUN_59207, 59207 RNA 3'-terminal phosphate cyclase domain; RNA... 0.07 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60321.1_4658 PRW60321 18S rRNA biogenesis RCL1 0.06 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496800.1_529 KAA8496800 Putative RNA 3'-terminal phosphate cyclase-like protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003724 RNA helicase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006479 protein methylation IEP Enrichment
BP GO:0006480 N-terminal protein amino acid methylation IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
BP GO:0008213 protein alkylation IEP Enrichment
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP Enrichment
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0030488 tRNA methylation IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
BP GO:0031365 N-terminal protein amino acid modification IEP Enrichment
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
CC GO:0034708 methyltransferase complex IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
CC GO:0043527 tRNA methyltransferase complex IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR023797 RNA3'_phos_cyclase_dom 7 359
IPR013791 RNA3'-term_phos_cycl_insert 189 306
No external refs found!