OT_07G03550.1


Description : Transcription factor CBF/NF-Y/archaeal histone domain [Interproscan].


Gene families : OG_01_0000661 (OrthoFinder) Phylogenetic Tree(s): OG0000661_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_07G03550.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000057.46 tig00000057_g65.t1 Cell cycle.interphase.DNA replication.elongation.DNA... 0.07 OrthoFinder
Cre07.g341800 30775065 Cell cycle.interphase.DNA replication.elongation.DNA... 0.05 OrthoFinder
Cz10g08040.t1 No alias Transcription factor CBF/NF-Y/archaeal histone domain... 0.02 OrthoFinder
Cz10g24060.t1 No alias Transcription factor CBF/NF-Y/archaeal histone domain... 0.02 OrthoFinder
EOD23620 No alias Transcription factor CBF/NF-Y/archaeal histone domain... 0.04 OrthoFinder
EOD25995 No alias DNA polymerase epsilon catalytic subunit 3 [Ensembl]. 0.03 OrthoFinder
Sro256_g100540.1 Contig3587.g27699 Polymerase epsilon subunit 3 0.02 OrthoFinder
Transcript_contig_6022 6022 Hypothetical protein 0.01 OrthoFinder
XM_002503573.1 MICPUN_60106, 60106 Transcription factor CBF/NF-Y/archaeal histone domain... 0.08 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
BP GO:0000077 DNA damage checkpoint signaling IEP Enrichment
BP GO:0000724 double-strand break repair via homologous recombination IEP Enrichment
BP GO:0000725 recombinational repair IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006333 chromatin assembly or disassembly IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
CC GO:0030896 checkpoint clamp complex IEP Enrichment
CC GO:0030915 Smc5-Smc6 complex IEP Enrichment
BP GO:0031570 DNA integrity checkpoint signaling IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
BP GO:0042770 signal transduction in response to DNA damage IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0106068 SUMO ligase complex IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 5 79
No external refs found!