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  5. OT_07G02780.1

OT_07G02780.1


Description : Replication factor A protein 3 [Interproscan].


Gene families : OG_01_0007168 (OrthoFinder) Phylogenetic Tree(s): OG0007168_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_07G02780.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000718.65 tig00000718_g3737.t1 Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.04 OrthoFinder
Cz12g02040.t1 No alias Replication factor A protein 3 [Interproscan]. 0.04 OrthoFinder
Vocar.0018s0055.1 32898699 Replication factor A protein 3 [Interproscan]. 0.03 OrthoFinder
XM_002499599.1 MICPUN_107716, 107716 Replication factor A protein 3 [Interproscan]. 0.07 OrthoFinder
XM_003058132.1 MicpuC2_39394, 39394 Replication factor A protein 3 [Interproscan]. 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
BP GO:0006310 DNA recombination IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
BP GO:0000077 DNA damage checkpoint signaling IEP Enrichment
CC GO:0000444 MIS12/MIND type complex IEP Enrichment
BP GO:0000724 double-strand break repair via homologous recombination IEP Enrichment
BP GO:0000725 recombinational repair IEP Enrichment
CC GO:0000818 nuclear MIS12/MIND complex IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006333 chromatin assembly or disassembly IEP Enrichment
BP GO:0006952 defense response IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016972 thiol oxidase activity IEP Enrichment
CC GO:0030896 checkpoint clamp complex IEP Enrichment
BP GO:0031570 DNA integrity checkpoint signaling IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0042770 signal transduction in response to DNA damage IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
InterPro domains Description Start Stop
IPR013970 Rfa2 4 100
No external refs found!