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  5. OT_07G02750.1

OT_07G02750.1


Description : Transcription elongation factor S-II, central domain; Spen paralogue and orthologue SPOC, C-terminal [Interproscan].


Gene families : OG_01_0000595 (OrthoFinder) Phylogenetic Tree(s): OG0000595_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_07G02750.1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Cre02.g073250 30785493 No description available 0.03 OrthoFinder
Cre09.g386350 30780863 Transcription elongation factor TFIIS OS=Arabidopsis thaliana 0.03 OrthoFinder
Transcript_contig_176 176 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006351 transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
CC GO:0008303 caspase complex IEP Enrichment
BP GO:0016255 attachment of GPI anchor to protein IEP Enrichment
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Enrichment
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
CC GO:0042765 GPI-anchor transamidase complex IEP Enrichment
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR003618 TFIIS_cen_dom 129 238
IPR012921 SPOC_C 411 527
No external refs found!