OT_07G01800.1


Description : Ribosomal protein L21-like [Interproscan].


Gene families : OG_01_0001206 (OrthoFinder) Phylogenetic Tree(s): OG0001206_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_07G01800.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001371.5 tig00001371_g8421.t1 50S ribosomal protein L21, mitochondrial OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre06.g299000 30778575, PRPL21 50S ribosomal protein L21, chloroplastic OS=Staurastrum... 0.21 OrthoFinder
Cre09.g388550 30780235, MRPL21 No description available 0.05 OrthoFinder
Cz10g19180.t1 No alias Ribosomal protein L21-like [Interproscan]. 0.17 OrthoFinder
Cz10g19190.t1 No alias Hypothetical protein 0.08 OrthoFinder
Dusal.0098s00017.1 33203615 Ribosomal protein L21-like [Interproscan]. 0.03 OrthoFinder
Sro1170_g248760.1 Contig3531.g27305 Protein L21 0.07 OrthoFinder
Sro51_chlor_g029900.1 Rpl21 Rpl21 0.07 OrthoFinder
SymbC1.scaffold10924.1 10924.1 Ribosomal protein L21-like [Interproscan]. 0.01 OrthoFinder
TPCG01970.1 No alias Ribosomal protein L21-like [Interproscan]. 0.07 OrthoFinder
TPCG03020.1 No alias Ribosomal protein L21-like [Interproscan]. 0.07 OrthoFinder
Vocar.0001s0246.1 32884851 Ribosomal protein L21-like [Interproscan]. 0.08 OrthoFinder
XM_002500115.1 MICPUN_89975, 89975 Ribosomal protein L21 0.22 OrthoFinder
XM_003058097.1 MicpuC2_47061, 47061 Ribosomal protein L21-like [Interproscan]. 0.1 OrthoFinder
XM_003062473.1 MicpuC2_51973, 51973 Ribosomal L21 protein, chloroplast precursor 0.04 OrthoFinder
lcl|BLLF01004819.1_cds_GFH30299.1_24776 HaLaN_29126, GFH30299 Plastid/chloroplast ribosomal protein L21 0.03 OrthoFinder
lcl|BLLF01006389.1_cds_GFH32203.1_26680 HaLaN_31385, GFH32203 Plastid/chloroplast ribosomal protein L21 0.07 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61049.1_51 PRW61049 50S ribosomal L21 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005840 ribosome IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004399 histidinol dehydrogenase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004820 glycine-tRNA ligase activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006426 glycyl-tRNA aminoacylation IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006839 mitochondrial transport IEP Enrichment
BP GO:0006848 pyruvate transport IEP Enrichment
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015718 monocarboxylic acid transport IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0098656 anion transmembrane transport IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901475 pyruvate transmembrane transport IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1990542 mitochondrial transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR028909 L21p-like 74 173
No external refs found!