OT_07G01130.1

Description : tRNA intron endonuclease, catalytic domain-like [Interproscan].

Gene families : OG_01_0005426 (OrthoFinder) Phylogenetic Tree(s): OG0005426_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: OT_07G01130.1
Cluster	HCCA: Cluster_53

Type	GO Term	Name	Evidence	Source
MF	GO:0000213	tRNA-intron endonuclease activity	IEA	Interproscan
BP	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004521	endoribonuclease activity	None	Extended
MF	GO:0004540	ribonuclease activity	None	Extended
MF	GO:0004549	tRNA-specific ribonuclease activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006388	tRNA splicing, via endonucleolytic cleavage and ligation	IEA	Interproscan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008380	RNA splicing	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016892	endoribonuclease activity, producing 3'-phosphomonoesters	None	Extended
MF	GO:0016894	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Enrichment
CC	GO:0000814	ESCRT II complex	IEP	Enrichment
MF	GO:0005507	copper ion binding	IEP	Enrichment
CC	GO:0005758	mitochondrial intermembrane space	IEP	Enrichment
BP	GO:0006825	copper ion transport	IEP	Enrichment
MF	GO:0008897	holo-[acyl-carrier-protein] synthase activity	IEP	Enrichment
CC	GO:0016272	prefoldin complex	IEP	Enrichment
MF	GO:0016530	metallochaperone activity	IEP	Enrichment
MF	GO:0016531	copper chaperone activity	IEP	Enrichment
BP	GO:0017004	cytochrome complex assembly	IEP	Enrichment
MF	GO:0020037	heme binding	IEP	Enrichment
CC	GO:0031970	organelle envelope lumen	IEP	Enrichment
CC	GO:0031974	membrane-enclosed lumen	IEP	Enrichment
CC	GO:0036452	ESCRT complex	IEP	Enrichment
CC	GO:0043233	organelle lumen	IEP	Enrichment
MF	GO:0046906	tetrapyrrole binding	IEP	Enrichment
CC	GO:0070013	intracellular organelle lumen	IEP	Enrichment
BP	GO:0071985	multivesicular body sorting pathway	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR006677	tRNA_intron_Endonuc_cat-like	171	246

External Links

No external refs found!

OT_07G01130.1

Expression Profile

Co-expression Networks

Functional Annotation