OT_07G00910.1

Description : Ubiquitin-like domain; Ribosomal protein S27a [Interproscan].

Gene families : OG_01_0000054 (OrthoFinder) Phylogenetic Tree(s): OG0000054_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: OT_07G00910.1
Cluster	HCCA: Cluster_69

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00022075.50	tig00022075_g23611.t1	Protein biosynthesis.cytosolic ribosome.large subunit...	0.09	OrthoFinder
Cre01.g007051	30788581	Protein biosynthesis.cytosolic ribosome.large subunit...	0.07	OrthoFinder
Cre06.g273600	30779902, RPS27a	Protein biosynthesis.cytosolic ribosome.small subunit...	0.21	OrthoFinder
Cz09g22150.t1	No alias	Ribosomal protein S27a [Interproscan].	0.19	OrthoFinder
Cz11g28020.t1	No alias	Ubiquitin-like domain [Interproscan].	0.02	OrthoFinder
Cz13g16210.t1	No alias	Ubiquitin-like domain [Interproscan].	0.04	OrthoFinder
Dusal.0222s00011.1	33201848	Ribosomal protein S27a; Ubiquitin-like domain [Interproscan].	0.11	OrthoFinder
Dusal.0519s00002.1	33200370	Ubiquitin-like domain [Interproscan].	0.03	OrthoFinder
Dusal.0808s00008.1	33188936	Ribosomal protein L40e; Ubiquitin-like domain [Interproscan].	0.03	OrthoFinder
EOD20885	No alias	Ubiquitin-like domain [Interproscan].	0.01	OrthoFinder
EOD24536	No alias	Ribosomal protein L41; Ubiquitin-like domain [Interproscan].	0.07	OrthoFinder
EOD32212	No alias	Ubiquitin-like domain; Ribosomal protein S27a [Interproscan].	0.12	OrthoFinder
EOD34096	No alias	Ribosomal protein L41; Ubiquitin-like domain [Interproscan].	0.07	OrthoFinder
PTI_07G02070.1	No alias	Ubiquitin-like domain; Ribosomal protein S27a [Interproscan].	0.14	OrthoFinder
Sro305_g112730.1	Contig560.g7114	Polyubiquitin (Fragment)	0.21	OrthoFinder
Sro490_g153470.1	Contig328.g4367	Polyubiquitin (Fragment)	0.23	OrthoFinder
TP05G02210.1	No alias	Ubiquitin-like domain; Ribosomal protein S27a [Interproscan].	0.11	OrthoFinder
Vocar.0002s0346.1	32890766	Ribosomal protein S27a; Ubiquitin-like domain [Interproscan].	0.1	OrthoFinder
Vocar.0009s0373.1	32893174	Ubiquitin-like domain [Interproscan].	0.02	OrthoFinder
Vocar.0024s0156.1	32890529	Ribosomal protein L40e; Ubiquitin-like domain [Interproscan].	0.05	OrthoFinder
XM_002501154.1	MICPUN_90428, 90428	Ribosomal protein S27a; Ubiquitin-like domain [Interproscan].	0.24	OrthoFinder
XM_002503017.1	MICPUN_82590, 82590	Ribosomal protein L40e; Ubiquitin-like domain [Interproscan].	0.13	OrthoFinder
XM_003058637.1	MicpuC2_17541, 17541	Ribosomal protein L40e; Ubiquitin-like domain [Interproscan].	0.11	OrthoFinder
lcl\|LHPG02000002.1_cds_PRW60289.1_4387	PRW60289	Ubiquitin-40S ribosomal S27a	0.08	OrthoFinder
lcl\|LHPG02000008.1_cds_PRW56465.1_9834	PRW56465	Ubiquitin-60S ribosomal L40	0.06	OrthoFinder
lcl\|VRMN01000001.1_cds_KAA8497693.1_6646	KAA8497693	Polyubiquitin	0.02	OrthoFinder
lcl\|VRMN01000002.1_cds_KAA8497057.1_786	KAA8497057	Ubiquitin-like protein 1-40S ribosomal protein S27a	0.09	OrthoFinder
lcl\|VRMN01000006.1_cds_KAA8493558.1_4320	KAA8493558	Ubiquitin-60S ribosomal protein L40-2	0.08	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0003743	translation initiation factor activity	IEP	Enrichment
MF	GO:0004425	indole-3-glycerol-phosphate synthase activity	IEP	Enrichment
MF	GO:0004664	prephenate dehydratase activity	IEP	Enrichment
MF	GO:0004779	sulfate adenylyltransferase activity	IEP	Enrichment
MF	GO:0004781	sulfate adenylyltransferase (ATP) activity	IEP	Enrichment
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Enrichment
MF	GO:0004813	alanine-tRNA ligase activity	IEP	Enrichment
MF	GO:0004820	glycine-tRNA ligase activity	IEP	Enrichment
MF	GO:0004832	valine-tRNA ligase activity	IEP	Enrichment
BP	GO:0006082	organic acid metabolic process	IEP	Enrichment
BP	GO:0006399	tRNA metabolic process	IEP	Enrichment
BP	GO:0006413	translational initiation	IEP	Enrichment
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Enrichment
BP	GO:0006419	alanyl-tRNA aminoacylation	IEP	Enrichment
BP	GO:0006426	glycyl-tRNA aminoacylation	IEP	Enrichment
BP	GO:0006438	valyl-tRNA aminoacylation	IEP	Enrichment
BP	GO:0006520	cellular amino acid metabolic process	IEP	Enrichment
BP	GO:0006558	L-phenylalanine metabolic process	IEP	Enrichment
BP	GO:0006839	mitochondrial transport	IEP	Enrichment
BP	GO:0006848	pyruvate transport	IEP	Enrichment
BP	GO:0006850	mitochondrial pyruvate transmembrane transport	IEP	Enrichment
MF	GO:0008097	5S rRNA binding	IEP	Enrichment
MF	GO:0008135	translation factor activity, RNA binding	IEP	Enrichment
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	Enrichment
BP	GO:0009094	L-phenylalanine biosynthetic process	IEP	Enrichment
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	IEP	Enrichment
BP	GO:0015711	organic anion transport	IEP	Enrichment
BP	GO:0015718	monocarboxylic acid transport	IEP	Enrichment
MF	GO:0016829	lyase activity	IEP	Enrichment
MF	GO:0016874	ligase activity	IEP	Enrichment
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Enrichment
BP	GO:0019752	carboxylic acid metabolic process	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
MF	GO:0030170	pyridoxal phosphate binding	IEP	Enrichment
BP	GO:0034660	ncRNA metabolic process	IEP	Enrichment
BP	GO:0043038	amino acid activation	IEP	Enrichment
BP	GO:0043039	tRNA aminoacylation	IEP	Enrichment
BP	GO:0043436	oxoacid metabolic process	IEP	Enrichment
BP	GO:0044281	small molecule metabolic process	IEP	Enrichment
MF	GO:0045182	translation regulator activity	IEP	Enrichment
BP	GO:0046942	carboxylic acid transport	IEP	Enrichment
MF	GO:0070279	vitamin B6 binding	IEP	Enrichment
MF	GO:0070566	adenylyltransferase activity	IEP	Enrichment
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Enrichment
MF	GO:0097159	organic cyclic compound binding	IEP	Enrichment
BP	GO:0098656	anion transmembrane transport	IEP	Enrichment
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Enrichment
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Enrichment
MF	GO:1901363	heterocyclic compound binding	IEP	Enrichment
BP	GO:1901475	pyruvate transmembrane transport	IEP	Enrichment
BP	GO:1902221	erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process	IEP	Enrichment
BP	GO:1902223	erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process	IEP	Enrichment
BP	GO:1990542	mitochondrial transmembrane transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002906	Ribosomal_S27a	102	147
IPR000626	Ubiquitin-like_dom	3	74

External Links

No external refs found!

OT_07G00910.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation