- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : LysM domain [Interproscan].
Gene families : OG_01_0018918 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: OT_07G00260.1 | |
| Cluster | HCCA: Cluster_39 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000439 | transcription factor TFIIH core complex | IEP | Enrichment |
| MF | GO:0001671 | ATPase activator activity | IEP | Enrichment |
| CC | GO:0005667 | transcription regulator complex | IEP | Enrichment |
| CC | GO:0005789 | endoplasmic reticulum membrane | IEP | Enrichment |
| BP | GO:0006289 | nucleotide-excision repair | IEP | Enrichment |
| BP | GO:0006629 | lipid metabolic process | IEP | Enrichment |
| BP | GO:0006650 | glycerophospholipid metabolic process | IEP | Enrichment |
| BP | GO:0006694 | steroid biosynthetic process | IEP | Enrichment |
| MF | GO:0008047 | enzyme activator activity | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008202 | steroid metabolic process | IEP | Enrichment |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Enrichment |
| BP | GO:0019748 | secondary metabolic process | IEP | Enrichment |
| MF | GO:0030234 | enzyme regulator activity | IEP | Enrichment |
| BP | GO:0030638 | polyketide metabolic process | IEP | Enrichment |
| CC | GO:0031090 | organelle membrane | IEP | Enrichment |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Enrichment |
| BP | GO:0046486 | glycerolipid metabolic process | IEP | Enrichment |
| BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | Enrichment |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Enrichment |
| MF | GO:0060590 | ATPase regulator activity | IEP | Enrichment |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | Enrichment |
| MF | GO:0098772 | molecular function regulator | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR018392 | LysM_dom | 69 | 120 |
| No external refs found! |