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  5. OT_06G04440.1

OT_06G04440.1


Description : Hypothetical protein


Gene families : OG_01_0002847 (OrthoFinder) Phylogenetic Tree(s): OG0002847_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_06G04440.1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Cz19g04020.t1 No alias WD40 repeat [Interproscan]. 0.01 OrthoFinder
PTI_13G00820.1 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder
Transcript_contig_10168 10168 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!