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  5. OT_06G04020.1

OT_06G04020.1


Description : MutL, C-terminal, dimerisation; DNA mismatch repair protein, S5 domain 2-like; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [Interproscan].


Gene families : OG_01_0000591 (OrthoFinder) Phylogenetic Tree(s): OG0000591_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_06G04020.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000057.93 tig00000057_g112.t1 DNA mismatch repair protein PMS1 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cre01.g036050 30789431, MLH1 DNA damage response.DNA repair mechanisms.mismatch... 0.04 OrthoFinder
Cre04.g227000 30791345 DNA damage response.DNA repair mechanisms.mismatch... 0.04 OrthoFinder
EOD06196 No alias DNA mismatch repair protein Mlh1, C-terminal [Interproscan]. 0.05 OrthoFinder
EOD22530 No alias Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase... 0.06 OrthoFinder
EOD41900 No alias MutL, C-terminal, dimerisation; Histidine kinase-, DNA... 0.06 OrthoFinder
Sro2629_g333080.1 Contig3211.g25384 Protein MutL 0.02 OrthoFinder
Vocar.0001s0720.1 32884462 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase;... 0.02 OrthoFinder
XM_002503161.1 MICPUN_96433, 96433 DNA mismatch repair and recombination (MLH1) 0.09 OrthoFinder
XM_003061181.1 MicpuC2_44648, 44648 DNA mismatch repair and recombination (Mlh1) 0.04 OrthoFinder
XM_003061945.1 MicpuC2_4434, 4434 DNA mismatch repair protein, MLH2/PMS1/Pms2 family (Pms1) 0.03 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497433.1_1162 KAA8497433 DNA mismatch repair protein MutL 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006298 mismatch repair IEA Interproscan
MF GO:0030983 mismatched DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEP Enrichment
BP GO:0000725 recombinational repair IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005092 GDP-dissociation inhibitor activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007062 sister chromatid cohesion IEP Enrichment
BP GO:0007064 mitotic sister chromatid cohesion IEP Enrichment
BP GO:0007264 small GTPase mediated signal transduction IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR014790 MutL_C 607 790
IPR013507 DNA_mismatch_S5_2-like 227 346
No external refs found!