Description : Autophagy-related protein 3, C-terminal; Autophagy-related protein 3; Autophagy-related protein 3, N-terminal [Interproscan].
Gene families : OG_01_0004023 (OrthoFinder) Phylogenetic Tree(s): OG0004023_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: OT_06G03840.1 | |
Cluster | HCCA: Cluster_41 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00020614.104 | tig00020614_g12219.t1 | Vesicle trafficking.autophagosome formation.ATG8/ATG12... | 0.02 | OrthoFinder | |
Transcript_contig_89313 | 89313 | Autophagy-related protein 3, C-terminal;... | 0.01 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000075 | cell cycle checkpoint signaling | IEP | Enrichment |
BP | GO:0000077 | DNA damage checkpoint signaling | IEP | Enrichment |
CC | GO:0000444 | MIS12/MIND type complex | IEP | Enrichment |
CC | GO:0000818 | nuclear MIS12/MIND complex | IEP | Enrichment |
MF | GO:0003677 | DNA binding | IEP | Enrichment |
BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
BP | GO:0006260 | DNA replication | IEP | Enrichment |
BP | GO:0006269 | DNA replication, synthesis of RNA primer | IEP | Enrichment |
BP | GO:0006281 | DNA repair | IEP | Enrichment |
BP | GO:0006333 | chromatin assembly or disassembly | IEP | Enrichment |
BP | GO:0006950 | response to stress | IEP | Enrichment |
BP | GO:0006952 | defense response | IEP | Enrichment |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Enrichment |
BP | GO:0007165 | signal transduction | IEP | Enrichment |
BP | GO:0010564 | regulation of cell cycle process | IEP | Enrichment |
BP | GO:0010948 | negative regulation of cell cycle process | IEP | Enrichment |
CC | GO:0018995 | host cellular component | IEP | Enrichment |
CC | GO:0030896 | checkpoint clamp complex | IEP | Enrichment |
BP | GO:0031570 | DNA integrity checkpoint signaling | IEP | Enrichment |
BP | GO:0033554 | cellular response to stress | IEP | Enrichment |
CC | GO:0033643 | host cell part | IEP | Enrichment |
CC | GO:0033646 | host intracellular part | IEP | Enrichment |
CC | GO:0033647 | host intracellular organelle | IEP | Enrichment |
CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Enrichment |
BP | GO:0035556 | intracellular signal transduction | IEP | Enrichment |
CC | GO:0042025 | host cell nucleus | IEP | Enrichment |
BP | GO:0042770 | signal transduction in response to DNA damage | IEP | Enrichment |
BP | GO:0045786 | negative regulation of cell cycle | IEP | Enrichment |
BP | GO:0048519 | negative regulation of biological process | IEP | Enrichment |
BP | GO:0048523 | negative regulation of cellular process | IEP | Enrichment |
BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
BP | GO:0050896 | response to stimulus | IEP | Enrichment |
BP | GO:0051716 | cellular response to stimulus | IEP | Enrichment |
BP | GO:0051726 | regulation of cell cycle | IEP | Enrichment |
CC | GO:0140513 | nuclear protein-containing complex | IEP | Enrichment |
BP | GO:1901987 | regulation of cell cycle phase transition | IEP | Enrichment |
BP | GO:1901988 | negative regulation of cell cycle phase transition | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007135 | Atg3/Atg10 | 198 | 258 |
No external refs found! |