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Description : rRNA-processing protein Fcf1/Utp23 [Interproscan].
Gene families : OG_01_0003875 (OrthoFinder) Phylogenetic Tree(s): OG0003875_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: OT_06G02130.1 | |
| Cluster | HCCA: Cluster_37 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00001073.2 | tig00001073_g6811.t1 | No description available | 0.06 | OrthoFinder | |
| Cre16.g679450 | 30777816 | No description available | 0.04 | OrthoFinder | |
| Cz03g11200.t1 | No alias | rRNA-processing protein Fcf1/Utp23 [Interproscan]. | 0.05 | OrthoFinder | |
| Sro1636_g287550.1 | Contig3111.g24736 | Processing protein FCF1 | 0.04 | OrthoFinder | |
| XM_002499722.1 | MICPUN_78885, 78885 | rRNA-processing protein Fcf1/Utp23 [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|LHPG02000005.1_cds_PRW58087.1_7664 | PRW58087 | RRNA-processing FCF1-like protein | 0.06 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0032040 | small-subunit processome | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001510 | RNA methylation | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
| BP | GO:0008612 | peptidyl-lysine modification to peptidyl-hypusine | IEP | Enrichment |
| BP | GO:0009451 | RNA modification | IEP | Enrichment |
| MF | GO:0016426 | tRNA (adenine) methyltransferase activity | IEP | Enrichment |
| MF | GO:0016429 | tRNA (adenine-N1-)-methyltransferase activity | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | Enrichment |
| BP | GO:0030488 | tRNA methylation | IEP | Enrichment |
| MF | GO:0030515 | snoRNA binding | IEP | Enrichment |
| CC | GO:0031515 | tRNA (m1A) methyltransferase complex | IEP | Enrichment |
| BP | GO:0032259 | methylation | IEP | Enrichment |
| CC | GO:0034708 | methyltransferase complex | IEP | Enrichment |
| BP | GO:0043414 | macromolecule methylation | IEP | Enrichment |
| CC | GO:0043527 | tRNA methyltransferase complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006984 | Fcf1/Utp23 | 94 | 190 |
| No external refs found! |