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  5. OT_06G01600.1

OT_06G01600.1


Description : RIO2 kinase winged helix domain, N-terminal; RIO1 family [Interproscan].


Gene families : OG_01_0003309 (OrthoFinder) Phylogenetic Tree(s): OG0003309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_06G01600.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021357.28 tig00021357_g20757.t1 Protein modification.phosphorylation.atypical kinase... 0.03 OrthoFinder
Cre03.g159900 30787817 Protein modification.phosphorylation.atypical kinase... 0.11 OrthoFinder
Cz11g02240.t1 No alias RIO2 kinase winged helix domain, N-terminal; RIO1 family... 0.08 OrthoFinder
Cz11g02250.t1 No alias RIO1 family [Interproscan]. 0.05 OrthoFinder
PTI_20G01000.1 No alias RIO2 kinase winged helix domain, N-terminal; RIO1 family... 0.02 OrthoFinder
Sro586_g171140.1 Contig1474.g13501 Protein kinase RIO2 0.12 OrthoFinder
TP03G08580.1 No alias RIO2 kinase winged helix domain, N-terminal; RIO1 family... 0.06 OrthoFinder
Transcript_contig_90045 90045 RIO2 kinase winged helix domain, N-terminal; RIO1 family... 0.02 OrthoFinder
Vocar.0005s0275.1 32883751 RIO2 kinase winged helix domain, N-terminal; RIO1 family... 0.04 OrthoFinder
XM_002500830.1 MICPUN_79518, 79518 RIO1 family; RIO2 kinase winged helix domain, N-terminal... 0.09 OrthoFinder
XM_003059416.1 MicpuC2_17560, 17560 RIO2 kinase winged helix domain, N-terminal; RIO1 family... 0.08 OrthoFinder
lcl|LHPG02000022.1_cds_PRW20749.1_5300 PRW20749 Serine threonine-kinase rio2 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0030488 tRNA methylation IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
CC GO:0034708 methyltransferase complex IEP Enrichment
BP GO:0036265 RNA (guanine-N7)-methylation IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
CC GO:0043527 tRNA methyltransferase complex IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0070475 rRNA base methylation IEP Enrichment
BP GO:0070476 rRNA (guanine-N7)-methylation IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR015285 RIO2_wHTH_N 8 89
No external refs found!