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  5. OT_06G01020.1

OT_06G01020.1


Description : Chaperonin Cpn60/TCP-1 family [Interproscan].


Gene families : OG_01_0002443 (OrthoFinder) Phylogenetic Tree(s): OG0002443_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_06G01020.1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000842.25 tig00000842_g4844.t1 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder
Cre05.g234639 30783461, CCT4 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 OrthoFinder
Cz08g02120.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.04 OrthoFinder
EOD26391 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
PTI_23G00040.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
Sro1769_g296510.1 Contig4211.g32041 Thermosome subunit beta (Fragment) 0.06 OrthoFinder
Vocar.0008s0413.1 32897283 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.04 OrthoFinder
XM_002501784.1 MICPUN_81357, 81357 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.06 OrthoFinder
XM_003059139.1 MicpuC2_47517, 47517 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000179.1_cds_GFH08706.1_3183 HaLaN_03717, GFH08706 T-complex protein 1 subunit delta 0.06 OrthoFinder
lcl|BLLF01001742.1_cds_GFH21006.1_15483 HaLaN_18221, GFH21006 T-complex protein 1 subunit delta 0.02 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56285.1_10299 PRW56285 T-complex 1 subunit delta 0.05 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495294.1_1292 KAA8495294 T-complex protein 1 subunit delta 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0005047 signal recognition particle binding IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Enrichment
BP GO:0006144 purine nucleobase metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006354 DNA-templated transcription, elongation IEP Enrichment
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
CC GO:0008023 transcription elongation factor complex IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
MF GO:0008767 UDP-galactopyranose mutase activity IEP Enrichment
BP GO:0009112 nucleobase metabolic process IEP Enrichment
BP GO:0009113 purine nucleobase biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
CC GO:0016593 Cdc73/Paf1 complex IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
BP GO:0030638 polyketide metabolic process IEP Enrichment
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
MF GO:0038024 cargo receptor activity IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0097020 COPII receptor activity IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 37 530
No external refs found!