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  5. OT_06G00220.1

OT_06G00220.1


Description : Proteasome, subunit alpha/beta [Interproscan].


Gene families : OG_01_0002755 (OrthoFinder) Phylogenetic Tree(s): OG0002755_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_06G00220.1
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021357.40 tig00021357_g20766.t1 Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana 0.09 OrthoFinder
Cre08.g373250 30773949, POA2 Protein degradation.26S proteasome.20S core... 0.11 OrthoFinder
Cz05g10060.t1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.05 OrthoFinder
Dusal.0724s00005.1 33190221 Proteasome, subunit alpha/beta; Proteasome... 0.01 OrthoFinder
EOD39539 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.06 OrthoFinder
PTI_25G01000.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.07 OrthoFinder
Sro63_g035860.1 Contig2778.g22351 Proteasome subunit alpha 0.16 OrthoFinder
TP22G01710.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.09 OrthoFinder
Vocar.0043s0030.1 32886890 Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.04 OrthoFinder
XM_002500738.1 MICPUN_56599, 56599 Proteasome, subunit alpha/beta [Interproscan]. 0.09 OrthoFinder
XM_003059320.1 MicpuC2_49610, 49610 Proteasome, subunit alpha/beta [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01002018.1_cds_GFH22338.1_16815 HaLaN_19789, GFH22338 Proteasome subunit alpha type 0.03 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44892.1_1655 PRW44892 20S proteasome alpha subunit B 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498323.1_7276 KAA8498323 Proteasome subunit alpha type-2-A 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0008767 UDP-galactopyranose mutase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009891 positive regulation of biosynthetic process IEP Enrichment
BP GO:0009893 positive regulation of metabolic process IEP Enrichment
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016972 thiol oxidase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0031325 positive regulation of cellular metabolic process IEP Enrichment
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Enrichment
BP GO:0032786 positive regulation of DNA-templated transcription, elongation IEP Enrichment
BP GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
BP GO:0034243 regulation of transcription elongation from RNA polymerase II promoter IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Enrichment
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0048518 positive regulation of biological process IEP Enrichment
BP GO:0048522 positive regulation of cellular process IEP Enrichment
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051254 positive regulation of RNA metabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Enrichment
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 30 213
No external refs found!