1. Home
  2. Species
  3. Ostreococcus tauri
  4. Sequence
  5. OT_05G04160.1

OT_05G04160.1


Description : Helicase-associated domain; Helicase, C-terminal; Domain of unknown function DUF1605 [Interproscan].


Gene families : OG_01_0000042 (OrthoFinder) Phylogenetic Tree(s): OG0000042_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_05G04160.1
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
EOD05883 No alias ATP-dependent RNA helicase [Ensembl]. 0.02 OrthoFinder
EOD10970 No alias Helicase, C-terminal; Domain of unknown function... 0.02 OrthoFinder
Transcript_contig_55707 55707 Helicase, C-terminal; S1 domain; DEAD/DEAH box helicase... 0.01 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496408.1_137 KAA8496408 Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005664 nuclear origin of replication recognition complex IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR011709 DUF1605 624 712
IPR007502 Helicase-assoc_dom 476 573
IPR001650 Helicase_C 283 414
No external refs found!