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  5. OT_05G03900.1

OT_05G03900.1


Description : Ribosomal protein L34 [Interproscan].


Gene families : OG_01_0004351 (OrthoFinder) Phylogenetic Tree(s): OG0004351_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_05G03900.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cre01.g030050 30788509, PRPL34 Protein biosynthesis.organelle translation... 0.14 OrthoFinder
Cz06g13050.t1 No alias Ribosomal protein L34 [Interproscan]. 0.05 OrthoFinder
TPCG02020.1 No alias Ribosomal protein L34 [Interproscan]. 0.05 OrthoFinder
TPCG02990.1 No alias Ribosomal protein L34 [Interproscan]. 0.05 OrthoFinder
Vocar.0001s0912.1 32885424 Ribosomal protein L34 [Interproscan]. 0.11 OrthoFinder
XM_002502551.1 MICPUN_108309, 108309 Ribosomal protein L34 [Interproscan]. 0.2 OrthoFinder
XM_003059178.1 MicpuC2_27297, 27297 Ribosomal protein L34 [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002151.1_cds_GFH22905.1_17382 HaLaN_20436, GFH22905 Hypothetical protein 0.01 OrthoFinder
lcl|BLLF01007548.1_cds_GFH32999.1_27476 HaLaN_32308, GFH32999 Ribosomal protein L34 [Interproscan]. 0.04 OrthoFinder
lcl|LHPG02000003.1_cds_PRW60083.1_6540 PRW60083 50S ribosomal L34 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004399 histidinol dehydrogenase activity IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000271 Ribosomal_L34 73 112
No external refs found!