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  5. OT_05G02950.1

OT_05G02950.1


Description : Ribosomal protein S15 [Interproscan].


Gene families : OG_01_0001372 (OrthoFinder) Phylogenetic Tree(s): OG0001372_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_05G02950.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000402.42 tig00000402_g219.t1 Protein biosynthesis.organelle translation... 0.01 OrthoFinder
Cpa|evm.model.tig00001206.21 tig00001206_g7508.t1 Protein biosynthesis.organelle translation... 0.09 OrthoFinder
Cpa|evm.model.tig00021127.67 tig00021127_g18744.t1 No description available 0.01 OrthoFinder
Cre06.g264300 30780052, PRPS15 Protein biosynthesis.organelle translation... 0.2 OrthoFinder
Cre17.g731250 30782143, MRPS15 No description available 0.04 OrthoFinder
Cz13g11200.t1 No alias Ribosomal protein S15 [Interproscan]. 0.03 OrthoFinder
Cz15g13260.t1 No alias Ribosomal protein S15 [Interproscan]. 0.05 OrthoFinder
EOD10800 No alias Ribosomal protein S15 [Interproscan]. 0.02 OrthoFinder
EOD28201 No alias Ribosomal protein S15 [Interproscan]. 0.04 OrthoFinder
EOD33978 No alias Ribosomal protein S15 [Interproscan]. 0.02 OrthoFinder
PTI_04G03090.1 No alias Ribosomal protein S15 [Interproscan]. 0.06 OrthoFinder
Sro2276_g321660.1 Contig3282.g25810 Protein S15 0.04 OrthoFinder
Sro48_g028080.1 Contig1255.g11703 Protein S15 0.05 OrthoFinder
TP03G04130.1 No alias Ribosomal protein S15 [Interproscan]. 0.06 OrthoFinder
Vocar.0002s0546.1 32890894 Ribosomal protein S15 [Interproscan]. 0.09 OrthoFinder
XM_002500566.1 MICPUN_79717, 79717 Ribosomal protein S15 [Interproscan]. 0.18 OrthoFinder
XM_003057207.1 MicpuC2_32255, 32255 Ribosomal protein S15 [Interproscan]. 0.09 OrthoFinder
lcl|LHPG02000021.1_cds_PRW20815.1_5044 PRW20815 30S ribosomal S15 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003919 FMN adenylyltransferase activity IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004107 chorismate synthase activity IEP Enrichment
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
CC GO:0009349 riboflavin synthase complex IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR000589 Ribosomal_S15 55 123
No external refs found!