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  5. OT_05G01490.1

OT_05G01490.1


Description : Ribosomal protein L29/L35 [Interproscan].


Gene families : OG_01_0003855 (OrthoFinder) Phylogenetic Tree(s): OG0003855_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_05G01490.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.79 tig00000241_g20941.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 OrthoFinder
Cre14.g617900 30776584, RPL35 Protein biosynthesis.cytosolic ribosome.large subunit... 0.16 OrthoFinder
Cz12g12300.t1 No alias Ribosomal protein L29/L35 [Interproscan]. 0.17 OrthoFinder
Dusal.0936s00001.1 33189602 Ribosomal protein L29/L35 [Interproscan]. 0.03 OrthoFinder
EOD14796 No alias Ribosomal protein L29/L35 [Interproscan]. 0.04 OrthoFinder
PTI_06G01310.1 No alias Ribosomal protein L29/L35 [Interproscan]. 0.24 OrthoFinder
Sro1394_g268940.1 Contig598.g7460 60S ribosomal protein L35 0.23 OrthoFinder
SymbC1.scaffold356.4 356.4 Ribosomal protein L29/L35 [Interproscan]. 0.04 OrthoFinder
TP12G02050.1 No alias Ribosomal protein L29/L35 [Interproscan]. 0.17 OrthoFinder
Vocar.0001s1458.1 32885943 Ribosomal protein L29/L35 [Interproscan]. 0.05 OrthoFinder
XM_002507650.1 MICPUN_107597, 107597 Ribosomal protein L29/L35 [Interproscan]. 0.1 OrthoFinder
XM_003056132.1 MicpuC2_49485, 49485 60S ribosomal protein L35 (RPL35) 0.13 OrthoFinder
lcl|LHPG02000021.1_cds_PRW20803.1_5002 PRW20803 60S ribosomal L35-like 0.07 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492667.1_9360 KAA8492667 60S ribosomal protein L35 0.12 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004526 ribonuclease P activity IEP Enrichment
MF GO:0004549 tRNA-specific ribonuclease activity IEP Enrichment
MF GO:0004779 sulfate adenylyltransferase activity IEP Enrichment
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Enrichment
MF GO:0004820 glycine-tRNA ligase activity IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006426 glycyl-tRNA aminoacylation IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 27 83
No external refs found!