OT_05G00710.1

Description : H/ACA ribonucleoprotein complex, subunit Nop10 [Interproscan].

Gene families : OG_01_0005275 (OrthoFinder) Phylogenetic Tree(s): OG0005275_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: OT_05G00710.1
Cluster	HCCA: Cluster_37

Target	Alias	Description	ECC score	Gene Family Method
Cre05.g237700	30783042, NOP10	RNA processing.RNA modification.pseudouridylation.H/ACA...	0.03	OrthoFinder
XM_002504884.1	MICPUN_86098, 86098	H/ACA ribonucleoprotein complex, subunit Nop10 [Interproscan].	0.03	OrthoFinder
lcl\|VRMN01000002.1_cds_KAA8497224.1_953	KAA8497224	H/ACA ribonucleoprotein complex subunit 3	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0022613	ribonucleoprotein complex biogenesis	None	Extended
MF	GO:0030515	snoRNA binding	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042254	ribosome biogenesis	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0008612	peptidyl-lysine modification to peptidyl-hypusine	IEP	Enrichment
MF	GO:0016763	pentosyltransferase activity	IEP	Enrichment
BP	GO:0018205	peptidyl-lysine modification	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
CC	GO:0030684	preribosome	IEP	Enrichment
CC	GO:0032040	small-subunit processome	IEP	Enrichment
BP	GO:0051604	protein maturation	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR007264	H/ACA_rnp_Nop10	26	75

External Links

No external refs found!

OT_05G00710.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation