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  5. OT_04G05240.1

OT_04G05240.1


Description : Zinc finger, PHD-finger; Bromo adjacent homology (BAH) domain; ATPase, AAA-type, core; AAA lid domain [Interproscan].


Gene families : OG_01_0000811 (OrthoFinder) Phylogenetic Tree(s): OG0000811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_04G05240.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000737.5 tig00000737_g3785.t1 Cell cycle.interphase.DNA... 0.04 OrthoFinder
Cpa|evm.model.tig00021070.70 tig00021070_g17875.t1 Cell cycle.interphase.DNA replication.preinitiation.CDC6... 0.06 OrthoFinder
Cre06.g292850 30778792, CDC6 No description available 0.02 OrthoFinder
Cre10.g455600 30789958, ORC1 Cell cycle.interphase.DNA... 0.06 OrthoFinder
EOD12119 No alias Bromo adjacent homology (BAH) domain; ATPase, AAA-type,... 0.07 OrthoFinder
EOD31487 No alias Zinc finger, PHD-finger [Interproscan]. 0.03 OrthoFinder
PTI_01G02210.1 No alias AAA+ ATPase domain [Interproscan]. 0.06 OrthoFinder
PTI_06G01140.1 No alias AAA lid domain; ATPase, AAA-type, core [Interproscan]. 0.02 OrthoFinder
PTI_07G04060.1 No alias Hypothetical protein 0.02 OrthoFinder
Sro395_g133970.1 Contig4272.g32316 Complex subunit 0.01 OrthoFinder
TP06G00210.1 No alias ATPase, AAA-type, core [Interproscan]. 0.02 OrthoFinder
TP10G03100.1 No alias ATPase, AAA-type, core [Interproscan]. 0.05 OrthoFinder
Transcript_contig_55058 55058 Zinc finger, PHD-finger; Bromo adjacent homology (BAH)... 0.02 OrthoFinder
Vocar.0063s0024.1 32883486 Hypothetical protein 0.02 OrthoFinder
XM_002501862.1 MICPUN_81192, 81192 Cdc6, C-terminal; AAA+ ATPase domain [Interproscan]. 0.06 OrthoFinder
XM_002506404.1 MICPUN_88660, 88660 AAA lid domain; Zinc finger, PHD-finger; ATPase,... 0.07 OrthoFinder
XM_003057583.1 MicpuC2_2525, 2525 Cdc6, C-terminal; Orc1-like, AAA ATPase domain [Interproscan]. 0.06 OrthoFinder
XM_003063314.1 MicpuC2_36249, 36249 AAA lid domain; Zinc finger, PHD-finger; Orc1-like, AAA... 0.03 OrthoFinder
lcl|BLLF01000446.1_cds_GFH11894.1_6371 HaLaN_07472, GFH11894 Origin recognition complex subunit 1 0.03 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61222.1_121 PRW61222 Origin recognition complex subunit 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000152 nuclear ubiquitin ligase complex IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003779 actin binding IEP Enrichment
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
MF GO:0005092 GDP-dissociation inhibitor activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005680 anaphase-promoting complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0007264 small GTPase mediated signal transduction IEP Enrichment
BP GO:0007346 regulation of mitotic cell cycle IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
BP GO:0032954 regulation of cytokinetic process IEP Enrichment
BP GO:0032955 regulation of division septum assembly IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0033044 regulation of chromosome organization IEP Enrichment
BP GO:0033045 regulation of sister chromatid segregation IEP Enrichment
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0044087 regulation of cellular component biogenesis IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051301 cell division IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
BP GO:0051983 regulation of chromosome segregation IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:1901891 regulation of cell septum assembly IEP Enrichment
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Enrichment
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Enrichment
BP GO:1905818 regulation of chromosome separation IEP Enrichment
InterPro domains Description Start Stop
IPR001025 BAH_dom 258 349
IPR019787 Znf_PHD-finger 183 230
IPR041083 AAA_lid_10 654 686
IPR003959 ATPase_AAA_core 478 617
No external refs found!