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  5. OT_04G04640.1

OT_04G04640.1


Description : WD40 repeat; Anaphase-promoting complex subunit 4, WD40 domain [Interproscan].


Gene families : OG_01_0000709 (OrthoFinder) Phylogenetic Tree(s): OG0000709_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_04G04640.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Cre09.g399911 30780367, CDC20 Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.02 OrthoFinder
Sro589_g171680.1 Contig2898.g23105 Cycle protein 20 homolog 0.02 OrthoFinder
XM_002502541.1 MICPUN_97422, 97422 Anaphase promoting complex protein (CDC20) 0.03 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32897.1_3759 PRW32897 WD40 repeat 0.02 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32950.1_3883 PRW32950 Cell division cycle 20 isoform B 0.06 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494868.1_3398 KAA8494868 Anaphase-promoting complex subunit cdc20 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003779 actin binding IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
MF GO:0005544 calcium-dependent phospholipid binding IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007076 mitotic chromosome condensation IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR024977 Apc4_WD40_dom 177 237
IPR001680 WD40_repeat 395 430
IPR001680 WD40_repeat 260 297
IPR001680 WD40_repeat 305 345
No external refs found!