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  5. OT_04G04370.1

OT_04G04370.1


Description : Ribosome biogenesis protein Nop16 [Interproscan].


Gene families : OG_01_0003168 (OrthoFinder) Phylogenetic Tree(s): OG0003168_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_04G04370.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000169.11 tig00000169_g11883.t1 No description available 0.03 OrthoFinder
Cre17.g726650 30782816 No description available 0.03 OrthoFinder
EOD03811 No alias Ribosome biogenesis protein Nop16 [Interproscan]. 0.04 OrthoFinder
EOD28436 No alias Ribosome biogenesis protein Nop16 [Interproscan]. 0.04 OrthoFinder
Sro1032_g233580.1 Contig2177.g18186 Ribosome biogenesis protein Nop16 [Interproscan]. 0.08 OrthoFinder
XM_002504021.1 MICPUN_60312, 60312 Ribosome biogenesis protein Nop16 [Interproscan]. 0.04 OrthoFinder
XM_003059554.1 MicpuC2_59031, 59031 Ribosome biogenesis protein Nop16 [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0036265 RNA (guanine-N7)-methylation IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0070475 rRNA base methylation IEP Enrichment
BP GO:0070476 rRNA (guanine-N7)-methylation IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR019002 Ribosome_biogenesis_Nop16 119 171
No external refs found!