1. Home
  2. Species
  3. Ostreococcus tauri
  4. Sequence
  5. OT_04G04090.1

OT_04G04090.1


Description : DNA polymerase V/Myb-binding protein 1A [Interproscan].


Gene families : OG_01_0003983 (OrthoFinder) Phylogenetic Tree(s): OG0003983_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_04G04090.1
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021108.9 tig00021108_g18299.t1 No description available 0.07 OrthoFinder
Cre01.g012350 30788907 No description available 0.2 OrthoFinder
Cz09g27060.t1 No alias DNA polymerase V/Myb-binding protein 1A [Interproscan]. 0.07 OrthoFinder
Dusal.0002s00021.1 33187998 DNA polymerase V/Myb-binding protein 1A [Interproscan]. 0.04 OrthoFinder
EOD16648 No alias DNA polymerase V/Myb-binding protein 1A [Interproscan]. 0.08 OrthoFinder
Transcript_contig_78668 78668 DNA polymerase V/Myb-binding protein 1A [Interproscan]. 0.02 OrthoFinder
Transcript_contig_78913 78913 DNA polymerase V/Myb-binding protein 1A [Interproscan]. 0.05 OrthoFinder
Transcript_contig_89760 89760 DNA polymerase V/Myb-binding protein 1A [Interproscan]. 0.06 OrthoFinder
Vocar.0002s0005.1 32890814 DNA polymerase V/Myb-binding protein 1A [Interproscan]. 0.04 OrthoFinder
XM_002506074.1 MICPUN_104038, 104038 DNA polymerase V/Myb-binding protein 1A [Interproscan]. 0.17 OrthoFinder
XM_003056723.1 MicpuC2_56167, 56167 DNA polymerase V/Myb-binding protein 1A [Interproscan]. 0.08 OrthoFinder
lcl|BLLF01001343.1_cds_GFH18714.1_13191 HaLaN_15562, GFH18714 Expressed protein 0.06 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61325.1_498 PRW61325 DNA polymerase V 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005730 nucleolus IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0008134 transcription factor binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003724 RNA helicase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP Enrichment
BP GO:0009245 lipid A biosynthetic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019213 deacetylase activity IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
CC GO:0034457 Mpp10 complex IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0046493 lipid A metabolic process IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901269 lipooligosaccharide metabolic process IEP Enrichment
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR007015 DNA_pol_V/MYBBP1A 37 817
No external refs found!