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  5. OT_04G02920.1

OT_04G02920.1


Description : RNA recognition motif domain [Interproscan].


Gene families : OG_01_0004549 (OrthoFinder) Phylogenetic Tree(s): OG0004549_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_04G02920.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
lcl|BLLF01000348.1_cds_GFH10797.1_5274 HaLaN_06178, GFH10797 RRM domain-containing protein 0.01 OrthoFinder
lcl|BLLF01006277.1_cds_GFH32120.1_26597 HaLaN_31285, GFH32120 Squamous cell carcinoma antigen recognized by T-cells 3 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Enrichment
MF GO:0004517 nitric-oxide synthase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005049 nuclear export signal receptor activity IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
MF GO:0005544 calcium-dependent phospholipid binding IEP Enrichment
CC GO:0005856 cytoskeleton IEP Enrichment
CC GO:0005885 Arp2/3 protein complex IEP Enrichment
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006497 protein lipidation IEP Enrichment
BP GO:0006505 GPI anchor metabolic process IEP Enrichment
BP GO:0006506 GPI anchor biosynthetic process IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
BP GO:0006809 nitric oxide biosynthetic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0007015 actin filament organization IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
CC GO:0008287 protein serine/threonine phosphatase complex IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0008375 acetylglucosaminyltransferase activity IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010638 positive regulation of organelle organization IEP Enrichment
CC GO:0015629 actin cytoskeleton IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
BP GO:0030832 regulation of actin filament length IEP Enrichment
BP GO:0030833 regulation of actin filament polymerization IEP Enrichment
BP GO:0030838 positive regulation of actin filament polymerization IEP Enrichment
BP GO:0031334 positive regulation of protein-containing complex assembly IEP Enrichment
BP GO:0032271 regulation of protein polymerization IEP Enrichment
BP GO:0032273 positive regulation of protein polymerization IEP Enrichment
BP GO:0032535 regulation of cellular component size IEP Enrichment
BP GO:0032956 regulation of actin cytoskeleton organization IEP Enrichment
BP GO:0032970 regulation of actin filament-based process IEP Enrichment
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Enrichment
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043254 regulation of protein-containing complex assembly IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044087 regulation of cellular component biogenesis IEP Enrichment
BP GO:0044089 positive regulation of cellular component biogenesis IEP Enrichment
BP GO:0045010 actin nucleation IEP Enrichment
BP GO:0045017 glycerolipid biosynthetic process IEP Enrichment
BP GO:0046209 nitric oxide metabolic process IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
BP GO:0046474 glycerophospholipid biosynthetic process IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051130 positive regulation of cellular component organization IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051493 regulation of cytoskeleton organization IEP Enrichment
BP GO:0051495 positive regulation of cytoskeleton organization IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
MF GO:0061630 ubiquitin protein ligase activity IEP Enrichment
MF GO:0061659 ubiquitin-like protein ligase activity IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
CC GO:0071203 WASH complex IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0090066 regulation of anatomical structure size IEP Enrichment
BP GO:0097435 supramolecular fiber organization IEP Enrichment
BP GO:0110053 regulation of actin filament organization IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
BP GO:1902903 regulation of supramolecular fiber organization IEP Enrichment
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Enrichment
CC GO:1903293 phosphatase complex IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment
BP GO:2001057 reactive nitrogen species metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 634 701
No external refs found!