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  5. OT_04G02100.1

OT_04G02100.1


Description : Squalene/phytoene synthase [Interproscan].


Gene families : OG_01_0000364 (OrthoFinder) Phylogenetic Tree(s): OG0000364_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_04G02100.1
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
EOD03919 No alias Aldose 1-/Glucose-6-phosphate 1-epimerase [Interproscan]. 0.02 OrthoFinder
Sro3214_g345430.1 Contig3122.g24807 Isopentenyl-diphosphate Delta-isomerase 1 0.02 OrthoFinder
Vocar.0002s0480.1 32890607 Aldose 1-/Glucose-6-phosphate 1-epimerase [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56102.1_10113 PRW56102 Aldose 1-epimerase 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
CC GO:0008303 caspase complex IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
CC GO:0042765 GPI-anchor transamidase complex IEP Enrichment
MF GO:0046422 violaxanthin de-epoxidase activity IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!