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  5. OT_04G01770.1

OT_04G01770.1


Description : RNA recognition motif domain [Interproscan].


Gene families : OG_01_0003158 (OrthoFinder) Phylogenetic Tree(s): OG0003158_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_04G01770.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cre16.g685200 30778004 No description available 0.03 OrthoFinder
Cz03g11190.t1 No alias RNA recognition motif domain [Interproscan]. 0.03 OrthoFinder
EOD12070 No alias RNA recognition motif domain [Interproscan]. 0.03 OrthoFinder
PTI_10G00250.1 No alias RNA recognition motif domain [Interproscan]. 0.04 OrthoFinder
Sro737_g195080.1 Contig1367.g12567 Multiple RNA-binding domain-containing protein 1 0.02 OrthoFinder
TP04G04110.1 No alias RNA recognition motif domain [Interproscan]. 0.03 OrthoFinder
XM_002501431.1 MICPUN_81062, 81062 RNA recognition motif domain [Interproscan]. 0.04 OrthoFinder
XM_003057974.1 MicpuC2_16164, 16164 RNA recognition motif domain [Interproscan]. 0.08 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 695 773
IPR000504 RRM_dom 364 434
IPR000504 RRM_dom 35 103
IPR000504 RRM_dom 570 626
IPR000504 RRM_dom 802 869
No external refs found!