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Description : LSM domain, eukaryotic/archaea-type [Interproscan].
Gene families : OG_01_0002828 (OrthoFinder) Phylogenetic Tree(s): OG0002828_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: OT_04G00610.1 | |
| Cluster | HCCA: Cluster_42 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre14.g611150 | 30776765 | RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... | 0.02 | OrthoFinder | |
| Dusal.0199s00010.1 | 33199104 | LSM domain, eukaryotic/archaea-type [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_06G04990.1 | No alias | LSM domain, eukaryotic/archaea-type [Interproscan]. | 0.02 | OrthoFinder | |
| Transcript_contig_78261 | 78261 | LSM domain, eukaryotic/archaea-type [Interproscan]. | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003924 | GTPase activity | IEP | Enrichment |
| MF | GO:0004514 | nicotinate-nucleotide diphosphorylase (carboxylating) activity | IEP | Enrichment |
| MF | GO:0005244 | voltage-gated ion channel activity | IEP | Enrichment |
| MF | GO:0005247 | voltage-gated chloride channel activity | IEP | Enrichment |
| MF | GO:0005253 | anion channel activity | IEP | Enrichment |
| MF | GO:0005254 | chloride channel activity | IEP | Enrichment |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | Enrichment |
| BP | GO:0006821 | chloride transport | IEP | Enrichment |
| BP | GO:0007275 | multicellular organism development | IEP | Enrichment |
| MF | GO:0008097 | 5S rRNA binding | IEP | Enrichment |
| MF | GO:0008308 | voltage-gated anion channel activity | IEP | Enrichment |
| BP | GO:0009435 | NAD biosynthetic process | IEP | Enrichment |
| BP | GO:0009555 | pollen development | IEP | Enrichment |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Enrichment |
| MF | GO:0016763 | pentosyltransferase activity | IEP | Enrichment |
| MF | GO:0016846 | carbon-sulfur lyase activity | IEP | Enrichment |
| BP | GO:0019359 | nicotinamide nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0019362 | pyridine nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0019363 | pyridine nucleotide biosynthetic process | IEP | Enrichment |
| MF | GO:0022832 | voltage-gated channel activity | IEP | Enrichment |
| MF | GO:0022836 | gated channel activity | IEP | Enrichment |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Enrichment |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | Enrichment |
| BP | GO:0032501 | multicellular organismal process | IEP | Enrichment |
| BP | GO:0032502 | developmental process | IEP | Enrichment |
| BP | GO:0046496 | nicotinamide nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0048229 | gametophyte development | IEP | Enrichment |
| BP | GO:0048856 | anatomical structure development | IEP | Enrichment |
| BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | Enrichment |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001163 | LSM_dom_euk/arc | 10 | 82 |
| No external refs found! |