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  5. OT_03G05120.1

OT_03G05120.1


Description : Vacuolar protein sorting-associated protein 13, N-terminal domain; Vacuolar protein sorting-associated protein 13, SHR-binding domain; Peroxin domain; Vacuolar protein sorting-associated protein 13, second N-terminal domain; Vacuolar protein sorting-associated protein 13, C-terminal; Vacuolar protein sorting-associated protein 62; VPS13, repeated coiled region [Interproscan].


Gene families : OG_01_0000454 (OrthoFinder) Phylogenetic Tree(s): OG0000454_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_03G05120.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.91 tig00000042_g15491.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00001343.3 tig00001343_g8327.t1 No description available 0.02 OrthoFinder
Cre17.g727600 30782771 No description available 0.02 OrthoFinder
Cre17.g728250 30782292 No description available 0.02 OrthoFinder
Cz02g19210.t1 No alias VPS13, repeated coiled region; Vacuolar protein... 0.02 OrthoFinder
Vocar.0031s0043.1 32890041 Hypothetical protein 0.02 OrthoFinder
XM_002506972.1 MICPUN_54783, 54783 Vacuolar protein sorting-associated protein 13, second... 0.02 OrthoFinder
XM_003054760.1 MicpuC2_49875, 49875 Vacuolar protein sorting-associated protein 13, second... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004806 triglyceride lipase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0006497 protein lipidation IEP Enrichment
BP GO:0006505 GPI anchor metabolic process IEP Enrichment
BP GO:0006506 GPI anchor biosynthetic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008375 acetylglucosaminyltransferase activity IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0045017 glycerolipid biosynthetic process IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
BP GO:0046474 glycerophospholipid biosynthetic process IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR031642 VPS13_mid_rpt 598 804
IPR009543 SHR-BD 3158 3450
IPR026854 VPS13-like_N 2 111
IPR009291 Vps62 1909 2023
IPR009291 Vps62 4150 4212
IPR009291 Vps62 2094 2223
IPR031645 VPS13_C 3703 3858
IPR031646 VPS13_N2 153 393
IPR010482 Peroxin 2757 2865
No external refs found!