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  5. OT_03G04980.1

OT_03G04980.1


Description : RNA recognition motif domain [Interproscan].


Gene families : OG_01_0005235 (OrthoFinder) Phylogenetic Tree(s): OG0005235_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_03G04980.1
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000829.13 tig00000829_g4656.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00020961.48 tig00020961_g16670.t1 No description available 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0004358 glutamate N-acetyltransferase activity IEP Enrichment
MF GO:0004525 ribonuclease III activity IEP Enrichment
MF GO:0004797 thymidine kinase activity IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006525 arginine metabolic process IEP Enrichment
BP GO:0006526 arginine biosynthetic process IEP Enrichment
BP GO:0006839 mitochondrial transport IEP Enrichment
BP GO:0006906 vesicle fusion IEP Enrichment
BP GO:0007030 Golgi organization IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016050 vesicle organization IEP Enrichment
MF GO:0019136 deoxynucleoside kinase activity IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
MF GO:0019206 nucleoside kinase activity IEP Enrichment
MF GO:0019829 ATPase-coupled cation transmembrane transporter activity IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
BP GO:0030150 protein import into mitochondrial matrix IEP Enrichment
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Enrichment
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Enrichment
BP GO:0048280 vesicle fusion with Golgi apparatus IEP Enrichment
BP GO:0048284 organelle fusion IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0061025 membrane fusion IEP Enrichment
BP GO:0065002 intracellular protein transmembrane transport IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0070585 protein localization to mitochondrion IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0071806 protein transmembrane transport IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0072655 establishment of protein localization to mitochondrion IEP Enrichment
BP GO:0090174 organelle membrane fusion IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
BP GO:1990542 mitochondrial transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 42 105
IPR000504 RRM_dom 234 287
No external refs found!