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  5. OT_03G03980.1

OT_03G03980.1


Description : RNA recognition motif domain [Interproscan].


Gene families : OG_01_0001699 (OrthoFinder) Phylogenetic Tree(s): OG0001699_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_03G03980.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000006.1_cds_KAA8493464.1_4226 KAA8493464 Polyadenylate-binding protein RBP47C' 0.01 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493602.1_4364 KAA8493602 Hypothetical protein 0.05 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493603.1_4365 KAA8493603 Polyadenylate-binding protein RBP47C' 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 217 281
IPR000504 RRM_dom 321 385
IPR000504 RRM_dom 47 114
No external refs found!