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  5. OT_03G03590.1

OT_03G03590.1


Description : Leucine-rich repeat [Interproscan].


Gene families : OG_01_0001293 (OrthoFinder) Phylogenetic Tree(s): OG0001293_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_03G03590.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Sro65_g036620.1 Contig155.g1732 Leucine Rich Repeat 0.02 OrthoFinder
SymbC1.scaffold407.3 407.3 Leucine-rich repeat [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 628 647
IPR001611 Leu-rich_rpt 400 418
IPR001611 Leu-rich_rpt 540 556
IPR001611 Leu-rich_rpt 425 447
IPR001611 Leu-rich_rpt 508 524
IPR001611 Leu-rich_rpt 603 618
IPR001611 Leu-rich_rpt 483 504
No external refs found!