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  5. OT_03G03430.1

OT_03G03430.1


Description : Zinc finger, C5HC2-type; JmjN domain; JmjC domain [Interproscan].


Gene families : OG_01_0000339 (OrthoFinder) Phylogenetic Tree(s): OG0000339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_03G03430.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Cre12.g514250 30792977 RNA biosynthesis.transcriptional activation.JUMONJI... 0.03 OrthoFinder
Cz01g27150.t1 No alias Zinc finger, C5HC2-type; JmjC domain; JmjN domain [Interproscan]. 0.03 OrthoFinder
Cz03g27170.t1 No alias JmjC domain [Interproscan]. 0.03 OrthoFinder
Transcript_contig_54742 54742 JmjN domain; JmjC domain [Interproscan]. 0.02 OrthoFinder
XM_002500439.1 MICPUN_99424, 99424 JmjN/JmjC protein 0.03 OrthoFinder
lcl|BLLF01000060.1_cds_GFH06869.1_1346 HaLaN_01579, GFH06869 JmjC domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW58727.1_7237 PRW58727 Lysine-specific demethylase 4A-like isoform X1 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006313 transposition, DNA-mediated IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
BP GO:0032196 transposition IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR003347 JmjC_dom 366 482
IPR004198 Znf_C5HC2 572 625
IPR003349 JmjN 126 159
No external refs found!