Description : Radical SAM; tRNA wybutosine-synthesis; Flavodoxin/nitric oxide synthase [Interproscan].
Gene families : OG_01_0004576 (OrthoFinder) Phylogenetic Tree(s): OG0004576_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: OT_03G03180.1 | |
Cluster | HCCA: Cluster_15 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre14.g623300 | 30776583, NCR1 | S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine... | 0.03 | OrthoFinder | |
PTI_13G03830.1 | No alias | Radical SAM; tRNA wybutosine-synthesis [Interproscan]. | 0.02 | OrthoFinder | |
Sro289_g109060.1 | Contig4471.g33590 | Methionine-dependent tRNA 4-demethylwyosine synthase | 0.02 | OrthoFinder | |
XM_002499429.1 | MICPUN_78848, 78848 | Flavodoxin/nitric oxide synthase; tRNA... | 0.03 | OrthoFinder | |
XM_003055685.1 | MicpuC2_1250, 1250 | Radical SAM; tRNA wybutosine-synthesis [Interproscan]. | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003824 | catalytic activity | IEA | Interproscan |
MF | GO:0010181 | FMN binding | IEA | Interproscan |
MF | GO:0051536 | iron-sulfur cluster binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000154 | rRNA modification | IEP | Enrichment |
BP | GO:0001510 | RNA methylation | IEP | Enrichment |
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0004749 | ribose phosphate diphosphokinase activity | IEP | Enrichment |
MF | GO:0005525 | GTP binding | IEP | Enrichment |
CC | GO:0005634 | nucleus | IEP | Enrichment |
CC | GO:0005732 | sno(s)RNA-containing ribonucleoprotein complex | IEP | Enrichment |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
BP | GO:0006364 | rRNA processing | IEP | Enrichment |
BP | GO:0006396 | RNA processing | IEP | Enrichment |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Enrichment |
MF | GO:0008649 | rRNA methyltransferase activity | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
MF | GO:0016435 | rRNA (guanine) methyltransferase activity | IEP | Enrichment |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
MF | GO:0016778 | diphosphotransferase activity | IEP | Enrichment |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
BP | GO:0031167 | rRNA methylation | IEP | Enrichment |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
CC | GO:0034457 | Mpp10 complex | IEP | Enrichment |
BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
BP | GO:0036265 | RNA (guanine-N7)-methylation | IEP | Enrichment |
BP | GO:0043414 | macromolecule methylation | IEP | Enrichment |
BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
BP | GO:0070475 | rRNA base methylation | IEP | Enrichment |
BP | GO:0070476 | rRNA (guanine-N7)-methylation | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Enrichment |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
No external refs found! |