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  5. OT_03G03170.1

OT_03G03170.1


Description : Chaperonin Cpn60/TCP-1 family [Interproscan].


Gene families : OG_01_0002508 (OrthoFinder) Phylogenetic Tree(s): OG0002508_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_03G03170.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cre10.g439100 30790162, CCT1 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.04 OrthoFinder
Cz06g06090.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
Dusal.1206s00002.1 33197631 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
EOD21347 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
Sro1027_g233030.1 Contig109.g1254 T-complex protein 1 subunit alpha (Fragment) 0.04 OrthoFinder
Transcript_contig_58198 58198 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
XM_002499911.1 MICPUN_90096, 90096 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
XM_003055156.1 MicpuC2_46385, 46385 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494500.1_3030 KAA8494500 T-complex protein 1 subunit alpha 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0004325 ferrochelatase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006783 heme biosynthetic process IEP Enrichment
BP GO:0010498 proteasomal protein catabolic process IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Enrichment
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 13 518
No external refs found!