OT_03G02900.1


Description : Aminoacyl-tRNA synthetase, class Ia; Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding [Interproscan].


Gene families : OG_01_0000866 (OrthoFinder) Phylogenetic Tree(s): OG0000866_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_03G02900.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000402.37 tig00000402_g214.t1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.01 OrthoFinder
Cre07.g350500 30774357 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.05 OrthoFinder
Cre12.g537100 30793066 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.07 OrthoFinder
Cz05g20150.t1 No alias Glutathione S-transferase, C-terminal; Aminoacyl-tRNA... 0.08 OrthoFinder
Cz06g08200.t1 No alias Aminoacyl-tRNA synthetase, class Ia; Valyl-tRNA... 0.03 OrthoFinder
Dusal.0452s00014.1 33191422 Aminoacyl-tRNA synthetase, class Ia [Interproscan]. 0.05 OrthoFinder
EOD05767 No alias Putative valyl-tRNA synthetase [Ensembl]. 0.05 OrthoFinder
EOD17893 No alias Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase,... 0.02 OrthoFinder
EOD28592 No alias Putative valyl-tRNA synthetase [Ensembl]. 0.01 OrthoFinder
PTI_13G01280.1 No alias Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase,... 0.03 OrthoFinder
Sro408_g136830.1 Contig3193.g25218 Valine--tRNA ligase (Fragment) 0.09 OrthoFinder
Sro427_g140590.1 Contig2653.g21430 Valine--tRNA ligase 0.04 OrthoFinder
TP18G02600.1 No alias Aminoacyl-tRNA synthetase, class Ia;... 0.05 OrthoFinder
TP20G01590.1 No alias Aminoacyl-tRNA synthetase, class Ia;... 0.02 OrthoFinder
Transcript_contig_89410 89410 Aminoacyl-tRNA synthetase, class Ia; Glutathione... 0.06 OrthoFinder
Vocar.0023s0186.1 32883240 Aminoacyl-tRNA synthetase, class Ia; Valyl-tRNA... 0.03 OrthoFinder
Vocar.0034s0041.1 32893008 Aminoacyl-tRNA synthetase, class Ia;... 0.03 OrthoFinder
XM_002501649.1 MICPUN_96323, 96323 Valyl-tRNA synthetase, tRNA-binding arm; Aminoacyl-tRNA... 0.05 OrthoFinder
XM_002508255.1 MICPUN_84188, 84188 Valyl-tRNA synthetase, tRNA-binding arm; Aminoacyl-tRNA... 0.04 OrthoFinder
XM_003062580.1 MicpuC2_45875, 45875 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase,... 0.06 OrthoFinder
lcl|BLLF01000439.1_cds_GFH11825.1_6302 HaLaN_07391, GFH11825 GST C-terminal domain-containing protein 0.04 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56769.1_9481 PRW56769 Valine-tRNA ligase isoform A 0.07 OrthoFinder
lcl|LHPG02000018.1_cds_PRW33017.1_3695 PRW33017 Valyl-tRNA synthetase 0.04 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494573.1_3103 KAA8494573 Valine--tRNA ligase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity IEP Enrichment
MF GO:0004107 chorismate synthase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0004827 proline-tRNA ligase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006188 IMP biosynthetic process IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006433 prolyl-tRNA aminoacylation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
BP GO:0009123 nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
MF GO:0016840 carbon-nitrogen lyase activity IEP Enrichment
MF GO:0016842 amidine-lyase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
BP GO:0046040 IMP metabolic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002300 aa-tRNA-synth_Ia 121 747
IPR013155 M/V/L/I-tRNA-synth_anticd-bd 796 946
No external refs found!